Oldest pages

Jump to navigation Jump to search

Showing below up to 240 results in range #1 to #240.

View (previous 250 | next 250) (20 | 50 | 100 | 250 | 500)

  1. Dcm GUI‏‎ (15:42, 21 March 2016)
  2. Classification‏‎ (10:47, 22 March 2016)
  3. Model pool‏‎ (11:27, 22 March 2016)
  4. Resolution‏‎ (10:39, 14 April 2016)
  5. Particle swapping in multireference projects‏‎ (08:42, 15 April 2016)
  6. Alignment mask‏‎ (12:29, 15 April 2016)
  7. Fourier acceleration‏‎ (08:38, 18 April 2016)
  8. Memory/speed balance during ccmatrix computation‏‎ (09:14, 19 April 2016)
  9. Cross correlation matrix‏‎ (10:16, 19 April 2016)
  10. Why is GPU not available for classification?‏‎ (11:10, 19 April 2016)
  11. Refined table‏‎ (09:15, 22 April 2016)
  12. Fourier Shell Correlation‏‎ (06:40, 27 April 2016)
  13. Volume table index file‏‎ (13:38, 27 April 2016)
  14. Dynamo catalogue tutorial‏‎ (14:10, 27 April 2016)
  15. Computing environments‏‎ (07:43, 29 April 2016)
  16. Pdf tutorials‏‎ (11:19, 29 April 2016)
  17. Subtomogram alignment‏‎ (17:02, 29 April 2016)
  18. Angular search‏‎ (07:56, 2 May 2016)
  19. Smoothing mask‏‎ (08:36, 2 May 2016)
  20. Example data sets‏‎ (16:34, 2 May 2016)
  21. Basel Dynamo Workshop 2013‏‎ (09:29, 18 May 2016)
  22. Basel Dynamo Workshop 2012‏‎ (09:30, 18 May 2016)
  23. Basel Dynamo Workshop 2015‏‎ (09:30, 18 May 2016)
  24. Basel Dynamo Workshop 2014‏‎ (09:31, 18 May 2016)
  25. Hints for improving a refinement‏‎ (13:53, 19 May 2016)
  26. Binning tomograms‏‎ (08:49, 20 May 2016)
  27. Getting help‏‎ (13:35, 20 May 2016)
  28. Projects on the command line‏‎ (08:46, 23 May 2016)
  29. Operations on tables‏‎ (09:35, 23 May 2016)
  30. Eigencomponents‏‎ (13:50, 26 May 2016)
  31. Spectral averages in PCA‏‎ (13:53, 26 May 2016)
  32. Video tutorials‏‎ (08:24, 1 June 2016)
  33. Helical symmetry‏‎ (13:32, 1 June 2016)
  34. Euler angles convention‏‎ (21:26, 4 August 2016)
  35. Filament types code example‏‎ (14:29, 15 August 2016)
  36. Filament model‏‎ (14:29, 15 August 2016)
  37. Walkthrough basic multireference‏‎ (11:06, 16 August 2016)
  38. Synthetic catalogue with filaments‏‎ (16:24, 16 August 2016)
  39. Walkthrough model worfklow reuse‏‎ (04:54, 17 August 2016)
  40. Materials Basel 2016‏‎ (09:12, 19 August 2016)
  41. Workstations EMBO 2016‏‎ (18:03, 29 August 2016)
  42. GPUs EMBO 2016‏‎ (07:58, 31 August 2016)
  43. EMBO workshop 2016‏‎ (15:51, 31 August 2016)
  44. Workshop exercises‏‎ (08:30, 1 September 2016)
  45. Dcm‏‎ (12:21, 1 September 2016)
  46. GPU‏‎ (06:44, 2 September 2016)
  47. Scripted creation of a project in the Linux command line‏‎ (09:05, 22 September 2016)
  48. Project parameter systemNoMPIWrapUnfoldingGPU‏‎ (14:57, 22 September 2016)
  49. MCR libraries‏‎ (09:33, 4 October 2016)
  50. Shift limits‏‎ (08:13, 26 October 2016)
  51. ''Dynamo''workshop at the New York Structural Biology Center 2016‏‎ (14:09, 9 December 2016)
  52. Example of membrane model workflow through the command line‏‎ (18:53, 1 February 2017)
  53. Seed oversampling‏‎ (11:51, 3 February 2017)
  54. Basic detector workflow for Lacey grids‏‎ (17:05, 13 February 2017)
  55. Grid hole picker‏‎ (17:07, 13 February 2017)
  56. Particle picking‏‎ (11:31, 23 February 2017)
  57. Adding models to catalogued volumes‏‎ (14:54, 23 February 2017)
  58. Matlab cell array‏‎ (15:09, 23 February 2017)
  59. Vesicle models‏‎ (09:00, 24 February 2017)
  60. Dipole set models‏‎ (16:20, 24 February 2017)
  61. Membrane models‏‎ (10:18, 28 February 2017)
  62. Montage viewer‏‎ (12:54, 28 February 2017)
  63. Example of post processing plugin with template update‏‎ (15:36, 3 March 2017)
  64. Postprocessing plugins‏‎ (17:07, 9 March 2017)
  65. Utilities for stack creation with the Hagen scheme‏‎ (10:52, 10 March 2017)
  66. 3d mouse‏‎ (08:25, 13 March 2017)
  67. Walkthrough on placement of averages on table positions‏‎ (09:14, 13 March 2017)
  68. Dynamo workshop 2016‏‎ (15:28, 4 April 2017)
  69. Operations on volumes‏‎ (09:45, 20 April 2017)
  70. Dynamo Matlab version‏‎ (15:03, 20 April 2017)
  71. Tomogram-table map file‏‎ (10:23, 26 April 2017)
  72. Oblique slices in tomoslice‏‎ (15:23, 27 April 2017)
  73. Prebinned tomograms‏‎ (14:19, 28 April 2017)
  74. Model‏‎ (09:00, 2 May 2017)
  75. Framework for estimation of membrane thickness‏‎ (10:09, 9 May 2017)
  76. Tips for management of tomographic data sets‏‎ (17:14, 16 May 2017)
  77. Table‏‎ (07:50, 1 June 2017)
  78. MCR CACHE ROOT‏‎ (17:30, 16 June 2017)
  79. Fourier mask on template‏‎ (08:25, 6 July 2017)
  80. Linking surfaces into point models‏‎ (13:25, 14 July 2017)
  81. Pasteur workshop 2017‏‎ (09:09, 19 July 2017)
  82. Catalogue‏‎ (20:28, 14 August 2017)
  83. Montage viewer for membrane picking‏‎ (21:03, 20 August 2017)
  84. Computers Basel 2016‏‎ (14:20, 24 August 2017)
  85. Materials Basel 2017‏‎ (07:58, 25 August 2017)
  86. Computers Basel 2017‏‎ (10:23, 25 August 2017)
  87. Dynamo workshop 2017‏‎ (08:05, 27 August 2017)
  88. Delft Workshop 2017‏‎ (11:51, 31 August 2017)
  89. Dynamo console‏‎ (18:59, 12 September 2017)
  90. Dcp GUI‏‎ (21:57, 13 September 2017)
  91. Construction of masks‏‎ (09:58, 14 September 2017)
  92. MPI Cluster‏‎ (11:09, 18 September 2017)
  93. Activation of Chimera UCSF‏‎ (17:59, 18 September 2017)
  94. Matlab workers‏‎ (15:57, 6 October 2017)
  95. DBox folder‏‎ (13:45, 12 October 2017)
  96. Border alignment artifact‏‎ (07:33, 13 October 2017)
  97. Daverage‏‎ (13:09, 13 October 2017)
  98. Dynamo in Amazon EC2‏‎ (08:56, 23 October 2017)
  99. GPU identifiers‏‎ (09:17, 25 October 2017)
  100. Subboxing‏‎ (15:54, 26 October 2017)
  101. Alignment project‏‎ (07:41, 27 October 2017)
  102. Multilevel refinement‏‎ (08:35, 27 October 2017)
  103. Programmatic depiction of objects in tomograms‏‎ (15:34, 30 October 2017)
  104. Tarring projects‏‎ (15:47, 6 November 2017)
  105. Fourier compensation during averaging‏‎ (10:06, 21 November 2017)
  106. Walkthrough on adaptive bandpass filtering‏‎ (18:12, 27 November 2017)
  107. Adaptive bandpass filtering‏‎ (07:10, 28 November 2017)
  108. Walkthrough on creation of 3d scenes‏‎ (10:46, 29 November 2017)
  109. Averaging of subtomograms‏‎ (16:09, 6 December 2017)
  110. Diamond Workshop 2017‏‎ (09:55, 7 December 2017)
  111. San Diego Workshop 2018‏‎ (17:58, 26 January 2018)
  112. Symmetrization during alignment‏‎ (11:50, 20 February 2018)
  113. Volume center‏‎ (09:01, 5 March 2018)
  114. Table column convention‏‎ (17:41, 8 March 2018)
  115. Prato Workshop 2018‏‎ (12:31, 12 April 2018)
  116. Particle extraction‏‎ (14:46, 24 April 2018)
  117. Standalone‏‎ (13:56, 4 May 2018)
  118. Library conflicts‏‎ (14:02, 4 May 2018)
  119. Cropping table‏‎ (12:49, 23 May 2018)
  120. Multireference alignment‏‎ (20:58, 6 June 2018)
  121. File access through predefined profiles‏‎ (14:07, 25 June 2018)
  122. Viewing tomograms‏‎ (09:49, 27 June 2018)
  123. Dtmshow‏‎ (10:17, 27 June 2018)
  124. Programmatic reconstruction of tomograms‏‎ (09:10, 3 July 2018)
  125. Pipelines for Workshop Heidelberg 2018‏‎ (08:27, 22 August 2018)
  126. GPUs EMBO 2018‏‎ (10:18, 26 August 2018)
  127. GPUs Basel 2018‏‎ (13:22, 27 August 2018)
  128. Basel Dynamo Workshop 2018‏‎ (13:26, 27 August 2018)
  129. Computers Basel 2018‏‎ (13:56, 27 August 2018)
  130. Materials Basel 2018‏‎ (20:43, 29 August 2018)
  131. EMBO workshop 2018‏‎ (07:01, 5 September 2018)
  132. Tomogram quality assessment‏‎ (14:34, 31 January 2019)
  133. Tilt series alignment workflow folder‏‎ (16:06, 6 February 2019)
  134. Example of use of dcoordinates‏‎ (18:44, 12 February 2019)
  135. Customized video montages‏‎ (08:33, 22 February 2019)
  136. Considerations for tilt series alignment in IMOD‏‎ (10:57, 27 March 2019)
  137. Prato Workshop 2019‏‎ (07:50, 4 April 2019)
  138. Considerations for tomogram positioning in IMOD‏‎ (13:34, 9 April 2019)
  139. Angle of astigmatism convention‏‎ (13:21, 10 April 2019)
  140. Practical Suggestions for Tomographic Reconstruction‏‎ (13:59, 30 April 2019)
  141. Dynamo Workshop at the International School of Crystallography 2019‏‎ (13:17, 5 June 2019)
  142. Programmatic control of alignment and reconstruction workflows‏‎ (16:35, 10 July 2019)
  143. Matlab Crash Course 2019‏‎ (09:42, 27 August 2019)
  144. GPUs Basel 2019‏‎ (10:51, 27 August 2019)
  145. Computers Basel 2019‏‎ (14:08, 27 August 2019)
  146. Materials Basel 2019‏‎ (13:17, 29 August 2019)
  147. Practicals Birkbeck 2019‏‎ (18:30, 2 September 2019)
  148. EMBO workshop 2019‏‎ (09:26, 6 September 2019)
  149. Data folder‏‎ (15:48, 30 September 2019)
  150. Generic data containers‏‎ (15:49, 30 September 2019)
  151. Table convention‏‎ (07:22, 25 November 2019)
  152. Cropping unbinned particles after having worked with binned particles‏‎ (16:50, 6 February 2020)
  153. Importing models‏‎ (09:51, 12 March 2020)
  154. Principal component analysis‏‎ (17:03, 28 March 2020)
  155. Indicating the missing wedge‏‎ (10:41, 3 April 2020)
  156. Volume list file‏‎ (14:24, 10 April 2020)
  157. Tilt angle convention‏‎ (11:42, 10 June 2020)
  158. Dynamo Workshop CIC bioGUNE 2020‏‎ (16:01, 11 August 2020)
  159. Multireference Analysis‏‎ (08:37, 19 August 2020)
  160. Integration with Warp and M‏‎ (11:47, 19 August 2020)
  161. EMBO workshop 2020‏‎ (14:19, 25 August 2020)
  162. Getting a Structure from Multiple Tomograms of HIV Capsids‏‎ (13:16, 27 August 2020)
  163. Running scripts in the background‏‎ (09:45, 19 November 2020)
  164. Dtmslice‏‎ (13:59, 27 November 2020)
  165. Jobs‏‎ (16:17, 22 December 2020)
  166. Walkthrough on PCA through the command line‏‎ (21:58, 8 February 2021)
  167. Walkthrough on filament models‏‎ (14:52, 12 August 2021)
  168. Walkthrough on membrane models‏‎ (08:23, 13 August 2021)
  169. Getting a Structure from Multiple Tomograms of HIV Capsids (walkthrough)‏‎ (12:13, 18 August 2021)
  170. Walkthrough for lattices on vesicles‏‎ (12:19, 18 August 2021)
  171. Starters guide (workshop version)‏‎ (17:27, 3 September 2021)
  172. Starters guide‏‎ (14:39, 6 September 2021)
  173. Walkthrough on GUI based tilt series alignment (EMBO2021)‏‎ (15:09, 6 September 2021)
  174. Walkthrough on command line based tilt series alignment (EMBO2021)‏‎ (16:06, 6 September 2021)
  175. EMBO workshop 2021‏‎ (16:07, 11 September 2021)
  176. Advanced starters guide (EMBO2021)‏‎ (10:09, 13 September 2021)
  177. Starters guide (EMBO2021)‏‎ (14:17, 13 September 2021)
  178. Basel Workshop 2019‏‎ (10:07, 12 October 2021)
  179. Hints for purchase of computing resources‏‎ (13:34, 24 January 2022)
  180. Main Page‏‎ (07:13, 29 March 2022)
  181. Walkthrough on localized reconstruction‏‎ (14:44, 8 August 2022)
  182. Particle File List‏‎ (12:30, 6 February 2023)
  183. Visualization tricks‏‎ (08:44, 8 July 2023)
  184. Depicting a cloud of observations on a tilt series‏‎ (10:12, 8 July 2023)
  185. Clouds of points defined on a tilt series (format)‏‎ (10:45, 9 July 2023)
  186. Walkthrough for template matching‏‎ (13:53, 1 August 2023)
  187. Walkthrough on vesicle models‏‎ (06:46, 15 August 2023)
  188. Advanced starters guide‏‎ (16:36, 15 August 2023)
  189. Advanced starters guide (PSI 2023)‏‎ (06:30, 16 August 2023)
  190. Getting started‏‎ (12:08, 16 August 2023)
  191. Walkthrough for template matching (PSI 2023)‏‎ (07:00, 17 August 2023)
  192. Downloads‏‎ (13:28, 30 August 2023)
  193. Walkthrough on GUI based tilt series alignment (EMBO2023)‏‎ (14:28, 8 September 2023)
  194. Walkthrough for template matching (EMBO2023)‏‎ (14:54, 8 September 2023)
  195. Starters guide (EMBO2023)‏‎ (14:56, 8 September 2023)
  196. Advanced starters guide (EMBO2023)‏‎ (14:58, 8 September 2023)
  197. Getting a Structure from Multiple Tomograms of HIV Capsids (EMBO2023)‏‎ (16:27, 8 September 2023)
  198. Walkthrough on command line based tilt series alignment (EMBO2023)‏‎ (12:06, 9 September 2023)
  199. Walkthrough on manual marker clicking (EMBO2023)‏‎ (12:10, 9 September 2023)
  200. EMBO workshop 2023‏‎ (12:28, 10 September 2023)
  201. Walkthrough on PCA through the command line (EMBO 2023)‏‎ (12:36, 10 September 2023)
  202. PSI Workshop 2023‏‎ (06:55, 6 October 2023)
  203. SciLife Lab Workshop for Subtomogram Averaging 2023‏‎ (14:32, 19 October 2023)
  204. Walkthrough on GUI based tilt series alignment (SciLifeLab 2023)‏‎ (11:12, 20 October 2023)
  205. Complete walkthrough on FHV virus (SciLifeLab 2023)‏‎ (11:53, 20 October 2023)
  206. Starters guide (SciLifeLab 2023)‏‎ (14:17, 25 October 2023)
  207. Walkthrough for template matching (SciLifeLab 2023)‏‎ (15:13, 25 October 2023)
  208. Walkthrough on manual marker clicking (SciLifeLab 2023)‏‎ (10:17, 26 October 2023)
  209. Walkthrough for lattices on vesicles (EMBO2023)‏‎ (12:21, 26 October 2023)
  210. Walkthrough on PCA through the command line (SciLifeLab 2023)‏‎ (15:17, 26 October 2023)
  211. SciLifeLab Workshop for Cryo Electron Tomography Processing‏‎ (06:47, 27 October 2023)
  212. Getting a Structure from Multiple Tomograms of HIV Capsids (Copenhagen 2024)‏‎ (15:37, 22 January 2024)
  213. Walkthrough for lattices on vesicles (Copenhagen 2024)‏‎ (15:42, 22 January 2024)
  214. Complete walkthrough on FHV virus (Copenhagen 2024)‏‎ (16:45, 22 January 2024)
  215. Walkthrough on PCA through the command line PSI 2023‏‎ (17:42, 22 January 2024)
  216. Walkthrough on manual marker clicking (Copenhagen 2024)‏‎ (18:04, 22 January 2024)
  217. Walkthrough on GUI based tilt series alignment (Copenhagen 2024)‏‎ (18:05, 22 January 2024)
  218. Walkthrough on command line based tilt series alignment (SciLifeLab 2023)‏‎ (18:08, 22 January 2024)
  219. Walkthrough on command line based tilt series alignment (Copenhagen 2024)‏‎ (18:08, 22 January 2024)
  220. Walkthrough on PCA through the command line (Copenhagen 2024)‏‎ (08:57, 24 January 2024)
  221. Starters guide (Copenhagen 2024)‏‎ (12:26, 25 January 2024)
  222. Copenhagen Workshop on Cryo Electron Tomography 2024‏‎ (14:32, 7 February 2024)
  223. High Resolution workflow for HIV1 (SciLifeLab 2023)‏‎ (12:26, 6 March 2024)
  224. HIV1 workshop‏‎ (12:27, 6 March 2024)
  225. HIV1 Walkthrough (PSI 2023)‏‎ (12:28, 6 March 2024)
  226. Compact HIV1 walkthrough (PSI 2023)‏‎ (12:29, 6 March 2024)
  227. Walkthrough on GUI based tilt series alignment‏‎ (11:39, 15 March 2024)
  228. Walkthrough on command line based tilt series alignment‏‎ (11:39, 15 March 2024)
  229. Walkthrough on manual marker clicking‏‎ (11:42, 15 March 2024)
  230. Installation‏‎ (10:44, 26 March 2024)
  231. Dynamo workshops‏‎ (10:20, 8 April 2024)
  232. Walkthrough for template matching (Göttingen 2024)‏‎ (11:14, 8 April 2024)
  233. Walkthrough on PCA through the command line (Göttingen 2024)‏‎ (11:16, 8 April 2024)
  234. High resolution walkthrough with HIV1 (Göttingen 2024)‏‎ (11:17, 8 April 2024)
  235. Starters guide (Göttingen 2024)‏‎ (11:19, 8 April 2024)
  236. Complete walkthrough on FHV virus (Göttingen 2024)‏‎ (11:20, 8 April 2024)
  237. Walkthrough on hexagonal lattice coherence through neighborhood analysis‏‎ (14:16, 11 April 2024)
  238. Göttingen Workshop 2024‏‎ (14:01, 12 April 2024)
  239. High resolution walkthrough with HIV1‏‎ (13:10, 22 April 2024)
  240. Neighborhood analysis‏‎ (11:51, 29 April 2024)

View (previous 250 | next 250) (20 | 50 | 100 | 250 | 500)