User contributions for AlmaVivas

8 September 2023

• 13:4913:49, 8 September 2023 diff hist +10,195 N Walkthrough on manual marker clicking (EMBO2023) Created page with "This walkthrough describes the tools to ''manually'' locate fiducial markers for tilt series alignment using different graphical tools. ''Automatic'' alignment is described in..."
• 13:2913:29, 8 September 2023 diff hist +11 EMBO workshop 2023 →Schedule

17 August 2023

• 13:2813:28, 17 August 2023 diff hist +3 Compact HIV1 walkthrough (PSI 2023) →Extraction of coarse half maps
• 13:2813:28, 17 August 2023 diff hist +3 Compact HIV1 walkthrough (PSI 2023) →Extraction of refined half maps
• 13:2713:27, 17 August 2023 diff hist +68 Compact HIV1 walkthrough (PSI 2023) →Computing an average of averages
• 13:2713:27, 17 August 2023 diff hist +14 Compact HIV1 walkthrough (PSI 2023) →Computing an average of averages
• 13:2613:26, 17 August 2023 diff hist +6 Compact HIV1 walkthrough (PSI 2023) →Extraction of first per tomogram average
• 13:2513:25, 17 August 2023 diff hist +3 Compact HIV1 walkthrough (PSI 2023) →Creation of initial reference
• 13:2513:25, 17 August 2023 diff hist +3 Compact HIV1 walkthrough (PSI 2023) →Creation of initial reference
• 13:2413:24, 17 August 2023 diff hist −2 Compact HIV1 walkthrough (PSI 2023) →Practical notes
• 13:2313:23, 17 August 2023 diff hist +34 Compact HIV1 walkthrough (PSI 2023) →Practical notes
• 13:2213:22, 17 August 2023 diff hist +70 Compact HIV1 walkthrough (PSI 2023) →Practical notes
• 13:1813:18, 17 August 2023 diff hist +3 Compact HIV1 walkthrough (PSI 2023) →Particle extraction
• 13:1713:17, 17 August 2023 diff hist −2 Compact HIV1 walkthrough (PSI 2023) →Particle extraction
• 13:1713:17, 17 August 2023 diff hist −1 Compact HIV1 walkthrough (PSI 2023) →Preparation and management of data
• 13:1613:16, 17 August 2023 diff hist −1 Compact HIV1 walkthrough (PSI 2023) →Particle picking
• 13:1613:16, 17 August 2023 diff hist −3 Compact HIV1 walkthrough (PSI 2023) →Particle picking
• 13:1613:16, 17 August 2023 diff hist −1 Compact HIV1 walkthrough (PSI 2023) →Preparation and management of data

16 August 2023

• 06:3106:31, 16 August 2023 diff hist −35 Walkthrough for template matching (PSI 2023) No edit summary
• 06:3006:30, 16 August 2023 diff hist −17 Advanced starters guide (PSI 2023) No edit summary
• 06:1806:18, 16 August 2023 diff hist +34 Advanced starters guide (PSI 2023) →Downloading
• 06:1406:14, 16 August 2023 diff hist +32 Walkthrough for template matching (PSI 2023) →Getting the tomogram
• 06:0806:08, 16 August 2023 diff hist +10 PSI Workshop 2023 →Laptops

15 August 2023

• 14:4514:45, 15 August 2023 diff hist +1 PSI Workshop 2023 →Laptops
• 14:3714:37, 15 August 2023 diff hist +156 PSI Workshop 2023 →Laptops
• 14:3114:31, 15 August 2023 diff hist −7 PSI Workshop 2023 →Laptops
• 14:3114:31, 15 August 2023 diff hist −2 PSI Workshop 2023 →Laptops
• 14:2914:29, 15 August 2023 diff hist +162 PSI Workshop 2023 →Laptops
• 14:0514:05, 15 August 2023 diff hist +141 PSI Workshop 2023 →Laptops
• 06:4606:46, 15 August 2023 diff hist −165 Walkthrough on vesicle models No edit summary

14 August 2023

• 17:1617:16, 14 August 2023 diff hist +17 HIV1 workshop No edit summary
• 15:1115:11, 14 August 2023 diff hist −10 HIV1 Walkthrough (PSI 2023) →Extraction of refined half maps
• 15:1015:10, 14 August 2023 diff hist +94,121 N HIV1 Walkthrough (PSI 2023) Created page with "= Goal = This walkthrough was designed to describe and discuss the steps necessary to go from the raw microscope data of a cryo-electron tomography experiment to a high-reso..."
• 15:0915:09, 14 August 2023 diff hist +13 PSI Workshop 2023 →Time Schedule
• 15:0015:00, 14 August 2023 diff hist +47,226 N Advanced starters guide (PSI 2023) Created page with "Category:Walkthroughs This walkthrough uses a small size example based on a real tomogram to cover several tasks. == The example data set == The data is a fraction of a..."
• 14:5714:57, 14 August 2023 diff hist +10 PSI Workshop 2023 →Time Schedule
• 14:5514:55, 14 August 2023 diff hist +26,121 N Walkthrough for template matching (PSI 2023) Created page with "Category:Walkthroughs ''Dynamo'' includes a set of tools for location of particles inside tomograms. The most simple one is ''template matching''. == Template matching =..."
• 14:4514:45, 14 August 2023 diff hist +11 PSI Workshop 2023 →Time Schedule
• 14:2614:26, 14 August 2023 diff hist 0 N File:Vesicle-step--13.png No edit summary current
• 14:2614:26, 14 August 2023 diff hist +1 Walkthrough on vesicle models →Extract subtomograms
• 14:2314:23, 14 August 2023 diff hist 0 Walkthrough on vesicle models →Generate subtomogram coordinates
• 14:2314:23, 14 August 2023 diff hist 0 Walkthrough on vesicle models →Extract subtomograms
• 14:2214:22, 14 August 2023 diff hist 0 N File:Vesicle-step-16.png No edit summary current
• 14:2214:22, 14 August 2023 diff hist 0 N File:Vesicle-step-15.png No edit summary current
• 14:2114:21, 14 August 2023 diff hist 0 N File:Vesicle-step-14.png No edit summary current
• 14:2014:20, 14 August 2023 diff hist 0 N File:Vesicle-step-12.png No edit summary current
• 14:2014:20, 14 August 2023 diff hist 0 N File:Vesicle-step-11.png No edit summary current
• 14:1914:19, 14 August 2023 diff hist 0 N File:Vesicle-step-10-a-b-c.png No edit summary current
• 14:1914:19, 14 August 2023 diff hist 0 N File:Vesicle-step-9.png No edit summary current
• 14:1814:18, 14 August 2023 diff hist 0 N File:Vesicle-step-8.png No edit summary current