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Combined display of all available logs of Dynamo. You can narrow down the view by selecting a log type, the username (case-sensitive), or the affected page (also case-sensitive).
(newest | oldest) View (newer 50 | older 50) (20 | 50 | 100 | 250 | 500)- 13:42, 25 February 2025 Raffaele Coray talk contribs created page Walkthrough for lattices on vesicles (Tsinghua Spring School 2025) (Created page with "Category:WalkthroughsSpecific this walkthrough shows the approach to process proteins that cover spheroidal vesicles following (approximately) a structured lattice. For d...")
- 13:40, 25 February 2025 Raffaele Coray talk contribs created page Getting a Structure from Multiple Tomograms of HIV Capsids (Tsinghua Spring School 2025) (Created page with "Category:WalkthroughsSpecific In this walkthrough you will get familiar with managing multiple tomograms through the ''Dynamo'' catalogue and developing strategies for al...")
- 13:37, 25 February 2025 Raffaele Coray talk contribs created page Walkthrough on PCA through the command line (Tsinghua Spring School 2025) (Created page with "Category:WalkthroughsSpecific PCA computations through the command line are governed through ''PCA workflow'' objects. We describe here h...")
- 13:36, 25 February 2025 Raffaele Coray talk contribs created page Walkthrough on hexagonal lattice coherence through neighborhood analysis (Tsinghua Spring School 2025) (Created page with "Category:WalkthroughsSpecific ==Neighborhood analysis== Neighbourhood analysis stands at the forefront of methods used to investigate geometrical lattice parameters and...")
- 13:34, 25 February 2025 Raffaele Coray talk contribs created page Walkthrough on command line based tilt series alignment (Tsinghua Spring School 2025) (Created page with "Category:WalkthroughsSpecific Dynamo includes a package for automated alignment and reconstruction of tilt series. This walkthrough guides users through a series of steps...")
- 13:33, 25 February 2025 Raffaele Coray talk contribs created page Walkthrough on GUI based tilt series alignment (Tsinghua Spring School 2025) (Created page with "Category:WalkthroughsSpecific ''Dynamo'' includes a package for automated alignment and reconstruction of tilt series. This walkthrough guides users through a series of s...")
- 13:31, 25 February 2025 Raffaele Coray talk contribs created page Walkthrough on manual marker clicking (Tsinghua Spring School 2025) (Created page with "Category:WalkthroughsSpecific This walkthrough describes the tools to ''manually'' locate fiducial markers for tilt series alignment using different graphical tools. ''Au...")
- 13:27, 25 February 2025 Raffaele Coray talk contribs created page Walkthrough for GUI-based template matching (Tsinghua Spring School 2025) (Created page with "Category:Walkthroughs == Template matching == In this technique, a template representing a molecule of interest is systematically cross-correlated against a tomogram, pr...")
- 13:21, 25 February 2025 Raffaele Coray talk contribs created page Walkthrough for template matching (Tsinghua Spring School 2025) (Created page with "Category:WalkthroughsSpecific ''Dynamo'' includes a set of tools for location of particles inside tomograms. The most simple one is ''template matching''. == Template ma...")
- 13:18, 25 February 2025 Raffaele Coray talk contribs created page Complete walkthrough on FHV virus (Tsinghua Spring School 2025) (Created page with "Category:WalkthroughsSpecific This walkthrough uses a small size example based on a real tomogram to cover several tasks. == The example data set == The data is a fract...")
- 13:17, 25 February 2025 Raffaele Coray talk contribs created page Starters guide (Tsinghua Spring School 2025) (Created page with "Category:WalkthroughsSpecific This tutorial shows how to manually pick particles in a tomogram, extract them, align and classify them. This tutorial is a shortened versio...")
- 09:44, 14 February 2025 Raffaele Coray talk contribs created page High resolution walkthrough with HIV1 (Tsinghua Spring School 2025) (Created page with "Category:WalkthroughsSpecific = Goal of the walktrough = This walktrough was designed to describe and discuss the steps necessary to go from the raw microscope data of a...")
- 13:12, 4 December 2024 Raffaele Coray talk contribs created page Template:DownloadLinkFHVDrive (Created page with "https://drive.google.com/file/d/1YM_g7uggoeaKs5ps4Sn_SKIK-bg5ET8a/view?usp=drive_link")
- 14:19, 3 December 2024 Raffaele Coray talk contribs created page File:Manual marker HIV TS.png
- 14:19, 3 December 2024 Raffaele Coray talk contribs uploaded File:Manual marker HIV TS.png
- 12:43, 3 December 2024 Raffaele Coray talk contribs created page Template:DownloadLinkFHVmembraneModel (Created page with "https://wiki.dynamo.biozentrum.unibas.ch/w/doc/data/fhv/membraneModel.omd")
- 12:43, 3 December 2024 Raffaele Coray talk contribs created page Template:DownloadLinkFHVaveragedLocalRefinement (Created page with "https://wiki.dynamo.biozentrum.unibas.ch/w/doc/data/fhv/averagedLocalRefinement.em")
- 12:42, 3 December 2024 Raffaele Coray talk contribs created page Template:DownloadLinkFHValignmentLocalRefinement (Created page with "https://wiki.dynamo.biozentrum.unibas.ch/w/doc/data/fhv/alignmentLocalRefinement.tbl")
- 12:28, 3 December 2024 Raffaele Coray talk contribs created page Template:DownloadLinkHighResHIV1presentation (Created page with "https://drive.google.com/file/d/1em6wWQUaB3mwIyL9LTnDyPG4Ks43quBK/view?usp=sharing")
- 12:22, 3 December 2024 Raffaele Coray talk contribs created page Template:DownloadLinkAWFmanualEMPIAR (Created page with "https://www.ebi.ac.uk/pdbe/emdb/empiar/entry/10064/")
- 12:22, 3 December 2024 Raffaele Coray talk contribs created page Template:DownloadLinklocResaliTS (Created page with "https://wiki.dynamo.biozentrum.unibas.ch/w/doc/data/t6ss/vc17_align.mrc")
- 12:21, 3 December 2024 Raffaele Coray talk contribs created page Template:DownloadLinkAWFHIV1TS (Created page with "https://drive.google.com/file/d/1EsnKBvbFuWD1njk8dRVLc3SlhdsTHIpY/view?usp=drive_link")
- 12:20, 3 December 2024 Raffaele Coray talk contribs created page Template:DownloadLinkNeighborhoodData (Created page with "https://drive.google.com/drive/folders/1K0Xn3CeuY5lTu4guu8xljJ8Nk7cTZRTt?usp=drive_link")
- 12:19, 3 December 2024 Raffaele Coray talk contribs created page Template:DownloadLinkBasicHIVTomo (Created page with "https://wiki.dynamo.biozentrum.unibas.ch/w/doc/data/hiv/v17.rec")
- 12:17, 3 December 2024 Raffaele Coray talk contribs created page Template:DownloadLinkHighResHIV1lightData (Created page with "https://drive.google.com/file/d/1k4bLLswsacYdIGcNRc76YcbAiycxyPuX/view?usp=drive_link")
- 12:16, 3 December 2024 Raffaele Coray talk contribs created page Template:DownloadLinkHighResHIV1scripts (Created page with "https://drive.google.com/file/d/1sM8OBQ7LF7OfhMPU0WwfJ31hVeXwTbCh/view?usp=drive_link")
- 12:16, 3 December 2024 Raffaele Coray talk contribs created page Template:DownloadLinkVLPs (Created page with "TODO")
- 12:15, 3 December 2024 Raffaele Coray talk contribs created page Template:DownloadLinkTemplateRetromer (Created page with "SORRY, THE TOMOGRAM AND TEMPLATE ARE CURRENLTY STILL UNDER EMBARGO. PLEASE CONTACT US TO ACCESS THE DATA.")
- 12:15, 3 December 2024 Raffaele Coray talk contribs created page Template:DownloadLinkTemplateMCP (Created page with "https://drive.google.com/file/d/1ME2r6cDw6_sJVtFPTFTgOVBWIuQn44Wl/view?usp=drive_link")
- 10:59, 3 December 2024 Raffaele Coray talk contribs moved page Walkthrough model worfklow reuse to Walkthrough model workflow reuse (typo)
- 14:02, 2 December 2024 Raffaele Coray talk contribs created page Category:Walkthroughs (Created page with "List of pages designed to help users to learn ''Dynamo'' functionalities through hands-on guided exercises.")
- 13:57, 2 December 2024 Raffaele Coray talk contribs created page Category:WalkthroughsSpecific (Created page with "List of materials for specific workshops.")
- 15:58, 29 November 2024 Raffaele Coray talk contribs created page File:SingleChunks multiple CC.png
- 15:58, 29 November 2024 Raffaele Coray talk contribs uploaded File:SingleChunks multiple CC.png
- 15:58, 29 November 2024 Raffaele Coray talk contribs created page File:SingleChunk assembled withZoom.png
- 15:58, 29 November 2024 Raffaele Coray talk contribs uploaded File:SingleChunk assembled withZoom.png
- 15:57, 29 November 2024 Raffaele Coray talk contribs created page File:Cc oblique chunk nobinning.png
- 15:57, 29 November 2024 Raffaele Coray talk contribs uploaded File:Cc oblique chunk nobinning.png
- 15:57, 29 November 2024 Raffaele Coray talk contribs created page File:Oblique GUIsettings retromer.png
- 15:57, 29 November 2024 Raffaele Coray talk contribs uploaded File:Oblique GUIsettings retromer.png
- 15:57, 29 November 2024 Raffaele Coray talk contribs created page File:Delete cone retromer cropped.png
- 15:57, 29 November 2024 Raffaele Coray talk contribs uploaded File:Delete cone retromer cropped.png
- 15:56, 29 November 2024 Raffaele Coray talk contribs created page File:Oriented chunk cone.png
- 15:56, 29 November 2024 Raffaele Coray talk contribs uploaded File:Oriented chunk cone.png
- 15:56, 29 November 2024 Raffaele Coray talk contribs created page File:Shown oblique chunk.png
- 15:56, 29 November 2024 Raffaele Coray talk contribs uploaded File:Shown oblique chunk.png
- 15:55, 29 November 2024 Raffaele Coray talk contribs created page File:Oblique chunk.png
- 15:55, 29 November 2024 Raffaele Coray talk contribs uploaded File:Oblique chunk.png
- 15:55, 29 November 2024 Raffaele Coray talk contribs created page File:Rotate chunk setup cropped.png
- 15:55, 29 November 2024 Raffaele Coray talk contribs uploaded File:Rotate chunk setup cropped.png
