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Combined display of all available logs of Dynamo. You can narrow down the view by selecting a log type, the username (case-sensitive), or the affected page (also case-sensitive).
(newest | oldest) View (newer 50 | older 50) (20 | 50 | 100 | 250 | 500)- 08:16, 20 October 2023 AlmaVivas talk contribs created page Complete walkthrough on FHV virus (SciLifeLab 2023) (Created page with "Category:Walkthroughs This walkthrough uses a small size example based on a real tomogram to cover several tasks. == The example data set == The data is a fraction of a...")
- 08:11, 20 October 2023 AlmaVivas talk contribs created page Walkthrough on command line based tilt series alignment (SciLifeLab 2023) (Created page with "This last tutorial on tilt series alignment is command line based. When woking under high data regimes, it is, perhaps, the most attractive option. = Create the workflow =...")
- 08:05, 20 October 2023 AlmaVivas talk contribs created page Walkthrough on GUI based tilt series alignment (SciLifeLab 2023) (Created page with "This walkthrough guides users through a series of steps on how to use it in GUI-based mode. = Data = Here we will be using the same data as in the Walkthrough on manual m...")
- 08:03, 20 October 2023 AlmaVivas talk contribs created page Walkthrough on manual marker clicking (SciLifeLab 2023) (Created page with "This walkthrough describes the tools to ''manually'' locate fiducial markers for tilt series alignment using different graphical tools. '''Note''' : the reader should be awa...")
- 07:56, 20 October 2023 AlmaVivas talk contribs created page Walkthrough on PCA through the command line (SciLifeLab 2023) (Created page with "PCA computations through the command line are governed through ''PCA workflow'' objects. We describe here how to create and handle them: = Cr...")
- 07:54, 20 October 2023 AlmaVivas talk contribs created page Walkthrough for template matching (SciLifeLab 2023) (Created page with "Category:Walkthroughs ''Dynamo'' includes a set of tools for location of particles inside tomograms. The most simple one is ''template matching''. == Template matching =...")
- 07:53, 20 October 2023 AlmaVivas talk contribs created page Starters guide (SciLifeLab 2023) (Created page with "This tutorial shows how to manually pick particles in a tomogram, extract them, align and classify them. This tutorial is a shortened version of the original Starters_guide...")
- 16:31, 8 September 2023 AlmaVivas talk contribs created page Walkthrough for lattices on vesicles (EMBO2023) (Created page with "This walkthrough shows the approach to process proteins that cover spheroidal vesicles following (approximately) a structured lattice. For demonstration, we use a highly binne...")
- 16:21, 8 September 2023 AlmaVivas talk contribs created page Getting a Structure from Multiple Tomograms of HIV Capsids (EMBO2023) (Created page with "In this walkthrough you will get familiar with managing multiple tomograms through the ''Dynamo'' catalogue and developing strategies for alignment projects to reach a reasona...")
- 14:58, 8 September 2023 AlmaVivas talk contribs created page Advanced starters guide (EMBO2023) (Created page with "Category:Walkthroughs This walkthrough uses a small size example based on a real tomogram to cover several tasks. == The example data set == The data is a fraction of a...")
- 14:56, 8 September 2023 AlmaVivas talk contribs created page Starters guide (EMBO2023) (Created page with "This tutorial shows how to manually pick particles in a tomogram, extract them, align and classify them. This tutorial is a shortened version of the original Starters_guide...")
- 14:54, 8 September 2023 AlmaVivas talk contribs created page Walkthrough for template matching (EMBO2023) (Created page with "Category:Walkthroughs ''Dynamo'' includes a set of tools for location of particles inside tomograms. The most simple one is ''template matching''. == Template matching =...")
- 14:34, 8 September 2023 AlmaVivas talk contribs created page Walkthrough on command line based tilt series alignment (EMBO2023) (Created page with "This last tutorial on tilt series alignment is command line based. When we are under a high data regime, it is, perhaps, the most attractive option. = Create the workflow =...")
- 14:23, 8 September 2023 AlmaVivas talk contribs created page Walkthrough on GUI based tilt series alignment (EMBO2023) (Created page with "This walkthrough guides users through a series of steps on how to use it in GUI-based mode. = Data = Here we will be using the same data as in the previous tutorial. So, if...")
- 13:49, 8 September 2023 AlmaVivas talk contribs created page Walkthrough on manual marker clicking (EMBO2023) (Created page with "This walkthrough describes the tools to ''manually'' locate fiducial markers for tilt series alignment using different graphical tools. ''Automatic'' alignment is described in...")
- 15:10, 14 August 2023 AlmaVivas talk contribs created page HIV1 Walkthrough (PSI 2023) (Created page with "= Goal = This walkthrough was designed to describe and discuss the steps necessary to go from the raw microscope data of a cryo-electron tomography experiment to a high-reso...")
- 15:00, 14 August 2023 AlmaVivas talk contribs created page Advanced starters guide (PSI 2023) (Created page with "Category:Walkthroughs This walkthrough uses a small size example based on a real tomogram to cover several tasks. == The example data set == The data is a fraction of a...")
- 14:55, 14 August 2023 AlmaVivas talk contribs created page Walkthrough for template matching (PSI 2023) (Created page with "Category:Walkthroughs ''Dynamo'' includes a set of tools for location of particles inside tomograms. The most simple one is ''template matching''. == Template matching =...")
- 14:26, 14 August 2023 AlmaVivas talk contribs created page File:Vesicle-step--13.png
- 14:26, 14 August 2023 AlmaVivas talk contribs uploaded File:Vesicle-step--13.png
- 14:22, 14 August 2023 AlmaVivas talk contribs created page File:Vesicle-step-16.png
- 14:22, 14 August 2023 AlmaVivas talk contribs uploaded File:Vesicle-step-16.png
- 14:22, 14 August 2023 AlmaVivas talk contribs created page File:Vesicle-step-15.png
- 14:22, 14 August 2023 AlmaVivas talk contribs uploaded File:Vesicle-step-15.png
- 14:21, 14 August 2023 AlmaVivas talk contribs created page File:Vesicle-step-14.png
- 14:21, 14 August 2023 AlmaVivas talk contribs uploaded File:Vesicle-step-14.png
- 14:20, 14 August 2023 AlmaVivas talk contribs created page File:Vesicle-step-12.png
- 14:20, 14 August 2023 AlmaVivas talk contribs uploaded File:Vesicle-step-12.png
- 14:20, 14 August 2023 AlmaVivas talk contribs created page File:Vesicle-step-11.png
- 14:20, 14 August 2023 AlmaVivas talk contribs uploaded File:Vesicle-step-11.png
- 14:19, 14 August 2023 AlmaVivas talk contribs created page File:Vesicle-step-10-a-b-c.png
- 14:19, 14 August 2023 AlmaVivas talk contribs uploaded File:Vesicle-step-10-a-b-c.png
- 14:19, 14 August 2023 AlmaVivas talk contribs created page File:Vesicle-step-9.png
- 14:19, 14 August 2023 AlmaVivas talk contribs uploaded File:Vesicle-step-9.png
- 14:18, 14 August 2023 AlmaVivas talk contribs created page File:Vesicle-step-8.png
- 14:18, 14 August 2023 AlmaVivas talk contribs uploaded File:Vesicle-step-8.png
- 14:17, 14 August 2023 AlmaVivas talk contribs created page File:Vesicle-step-7.png
- 14:17, 14 August 2023 AlmaVivas talk contribs uploaded File:Vesicle-step-7.png
- 14:17, 14 August 2023 AlmaVivas talk contribs created page File:Vesicle-step-6.png
- 14:17, 14 August 2023 AlmaVivas talk contribs uploaded File:Vesicle-step-6.png
- 14:16, 14 August 2023 AlmaVivas talk contribs created page File:Vesicle-step-5.png
- 14:16, 14 August 2023 AlmaVivas talk contribs uploaded File:Vesicle-step-5.png
- 14:16, 14 August 2023 AlmaVivas talk contribs created page File:Vesicle-step-4.png
- 14:16, 14 August 2023 AlmaVivas talk contribs uploaded File:Vesicle-step-4.png
- 14:15, 14 August 2023 AlmaVivas talk contribs created page File:Vesicle-step-2.png
- 14:15, 14 August 2023 AlmaVivas talk contribs uploaded File:Vesicle-step-2.png
- 14:15, 14 August 2023 AlmaVivas talk contribs created page File:Vesicle-step-1.png
- 14:15, 14 August 2023 AlmaVivas talk contribs uploaded File:Vesicle-step-1.png
- 14:15, 14 August 2023 AlmaVivas talk contribs created page Walkthrough on vesicle models (Created page with "This walkthrough is a step-by-step guide that teaches how to extract subtomograms from vesicle-like structures using the Dynamo vesicle models. ===Data=== We are going to de...")
