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- 11:20, 8 April 2024 Complete walkthrough on FHV virus (Göttingen 2024) (hist) [47,302 bytes] AlmaVivas (talk | contribs) (Created page with "Category:Walkthroughs This walkthrough uses a small size example based on a real tomogram to cover several tasks. == The example data set == The data is a fraction of a...")
- 11:19, 8 April 2024 Starters guide (Göttingen 2024) (hist) [15,560 bytes] AlmaVivas (talk | contribs) (Created page with "This tutorial shows how to manually pick particles in a tomogram, extract them, align and classify them. This tutorial is a shortened version of the original Starters_guide...")
- 11:17, 8 April 2024 High resolution walkthrough with HIV1 (Göttingen 2024) (hist) [106,626 bytes] AlmaVivas (talk | contribs) (Created page with "= Goal of the walktrough = This walktrough was designed to describe and discuss the steps necessary to go from the raw microscope data of a cryo-electron tomography experimen...")
- 11:16, 8 April 2024 Walkthrough on PCA through the command line (Göttingen 2024) (hist) [25,806 bytes] AlmaVivas (talk | contribs) (Created page with "PCA computations through the command line are governed through ''PCA workflow'' objects. We describe here how to create and handle them: = C...")
- 11:12, 8 April 2024 Walkthrough for template matching (Göttingen 2024) (hist) [26,071 bytes] AlmaVivas (talk | contribs) (Created page with "Category:Walkthroughs ''Dynamo'' includes a set of tools for location of particles inside tomograms. The most simple one is ''template matching''. == Template matching =...")
- 08:55, 8 April 2024 Walkthrough on hexagonal lattice coherence through neighborhood analysis (hist) [7,562 bytes] AlmaVivas (talk | contribs) (Created page with "Category:Walkthroughs ==Neighborhood analysis== Neighbourhood analysis stands at the forefront of methods used to investigate geometrical lattice parameters and offers...")
- 09:36, 27 March 2024 Neighborhood analysis (hist) [6,181 bytes] Raffaele Coray (talk | contribs) (Created page with "= Concept = The neighborhood analysis is a tool available in Dynamo that is meant to help describe the local spatial relationships of particles, especially after STA. As such...")
- 11:45, 28 February 2024 Göttingen Workshop 2024 (hist) [7,667 bytes] Daniel Castaño (talk | contribs) (Created page with "= Workshop = The PSI Dynamo workshop will take place from August the 16th to August the 18th in the Paul Scherrer Institute. The workshop provides hands-on training in all pr...")
- 18:08, 22 January 2024 Walkthrough on command line based tilt series alignment (Copenhagen 2024) (hist) [5,479 bytes] AlmaVivas (talk | contribs) (Created page with "This last tutorial on tilt series alignment is command line based. When woking under high data regimes, it is, perhaps, the most attractive option. = Create the workflow =...")
- 18:05, 22 January 2024 Walkthrough on GUI based tilt series alignment (Copenhagen 2024) (hist) [20,475 bytes] AlmaVivas (talk | contribs) (Created page with " This walkthrough guides users through a series of steps on how to use it in GUI-based mode. = Data = Here we will be using the same data as in the Walkthrough on manual...")
- 18:04, 22 January 2024 Walkthrough on manual marker clicking (Copenhagen 2024) (hist) [9,655 bytes] AlmaVivas (talk | contribs) (Created page with "This walkthrough describes the tools to ''manually'' locate fiducial markers for tilt series alignment using different graphical tools. '''Note''' : the reader should be awa...")
- 17:04, 22 January 2024 Walkthrough on PCA through the command line (Copenhagen 2024) (hist) [25,806 bytes] AlmaVivas (talk | contribs) (Created page with "PCA computations through the command line are governed through ''PCA workflow'' objects. We describe here how to create and handle them: = Cr...")
- 16:37, 22 January 2024 Complete walkthrough on FHV virus (Copenhagen 2024) (hist) [47,302 bytes] AlmaVivas (talk | contribs) (Created page with "Category:Walkthroughs This walkthrough uses a small size example based on a real tomogram to cover several tasks. == The example data set == The data is a fraction of a...")
- 15:42, 22 January 2024 Walkthrough for lattices on vesicles (Copenhagen 2024) (hist) [18,759 bytes] AlmaVivas (talk | contribs) (Created page with "his walkthrough shows the approach to process proteins that cover spheroidal vesicles following (approximately) a structured lattice. For demonstration, we use a highly binned...")
- 15:37, 22 January 2024 Getting a Structure from Multiple Tomograms of HIV Capsids (Copenhagen 2024) (hist) [22,196 bytes] AlmaVivas (talk | contribs) (Created page with "In this walkthrough you will get familiar with managing multiple tomograms through the ''Dynamo'' catalogue and developing strategies for alignment projects to reach a reasona...")
- 15:21, 22 January 2024 Starters guide (Copenhagen 2024) (hist) [15,560 bytes] AlmaVivas (talk | contribs) (Created page with "This tutorial shows how to manually pick particles in a tomogram, extract them, align and classify them. This tutorial is a shortened version of the original Starters_guide...")