Particle File List - Revision history

Daniel Castaño: /* Converting one single data folder */

2023-02-06T12:30:48Z

Converting one single data folder

2023-02-06T12:29:26Z

2020-11-30T11:01:38Z

The particle list star file

2020-11-11T14:39:41Z

Merging several data folders

2020-07-08T09:32:10Z

Example of use

2020-07-08T09:30:21Z

Example of use

2019-09-30T16:56:04Z

2019-09-30T16:55:23Z

Converting one single data folder

2019-09-30T16:54:30Z

Converting one single data folder

2019-09-30T16:54:18Z

Converting one single data folder

@@ Line 76: / Line 76: @@
 You can get a file representing a <tt>ParticleFileList</tt> object simply with the command:
-  <tt> dpkdata.containers.ParticleListFile.data2starFile( inputDataFolder> , outputStarFile); </tt>
+  <tt> dpkdata.containers.ParticleListFile.data2starFile( <inputDataFolder> , outputStarFile); </tt>
 This file can be used as input for  <tt>average</tt> or an alignment project. You can use a <tt>table</tt> flag in order to pass a table.

@@ Line 25: / Line 25: @@
 _particleFile
   <absolute path>/particle_00008.em
-  <absolute path>particle_00009.em</nowiki>
+  <absolute path>/particle_00009.em</nowiki>
 Conversely, if you have a <tt>star</tt> file in your disk, you can create a <tt>ParticleListFile</tt> object out of it first initializing the object:

← Older revision		Revision as of 11:01, 30 November 2020
Line 50:		Line 50:

	<tt> plfNew.fillFromStarFile('test.star');</tt>		<tt> plfNew.fillFromStarFile('test.star');</tt>
		+
		+	Both steps (creation of object and reading of contents) can be done in one as:
		+
		+	<tt> plfNew = dpkdata.containers.ParticleListFile.read('test.star');</tt>

	Now, the tag and particleFile properties should be filled:		Now, the tag and particleFile properties should be filled:

@@ Line 81: / Line 81: @@
 The command for this functionality is:
   <tt>dpkdata.containers.ParticleListFile.mergeDataFolders</tt>
- which is be fed with a cell array of names of data folders. Here, you can pass along a cell array of tables (one per data folder) using the flag <tt>table</tt>
 = Example of use =

@@ Line 124: / Line 124: @@
 % computes the average in the classical way
 ws = daverage(plf,'t',tMerged); </nowiki>
 = Metadata =

@@ Line 115: / Line 115: @@
 % we can pass a table attached to each data folder
-plf = dpkdata.containers.ParticleListFile.mergeDataFolders(dataname,'tables',tablename);
+plf = dpkdata.containers.ParticleListFile.mergeDataFolders(dataname,'tables',tableName);
 % The storage object keeps track of the accumulated metadata

@@ Line 72: / Line 72: @@
 You can get a file representing a <tt>ParticleFileList</tt> object simply with the command:
-  <tt> dpkdata.containers.ParticleListFile.data2starFile( data, <star file>); </tt>
+  <tt> dpkdata.containers.ParticleListFile.data2starFile( <data folder>, <star file>); </tt>
 This file can be used as input for  <tt>average</tt> or an alignment project. You can use a <tt>table</tt> flag in order to pass a table.